Jung/Frey

hjung
efrey
pfeil nach oben
pfeil nach oben

The emergence of cooperative traits (like production of public goods) in microbial populations and their maintenance in the presence of free-riders is a central problem in evolutionary biology. In the first funding period, our focus was on the effect of demographic noise on growth dynamics and composition of cooperative bacterial populations under non-selective and selective conditions, combining experiments and theory. We showed that under non-selective conditions, growing populations never fixate to a trait, but adjust to a random steady state composition. In selective conditions, we experimentally validated our theoretical prediction that demographic noise leads to a transient increase in the fraction of public good producers in an ensemble of populations. To this end, we established a synthetic ecosystem and identified experimental conditions for cooperative behavior in Pseudomonas populations. Moreover, we showed that the expression of pyoverdine synthesis genes is phenotypically heterogeneous in a Pseudomonas population, and is modulated by iron availability. In the second funding period, we intend to broaden the scope of the project and proceed along two main lines of research. First, we develop a more mechanistic molecular understanding of gene regulatory mechanisms underlying pyoverdine production and consumption, as well as its effect on the growth rate of producer and non-producer strains. Previous theoretical models partially neglected the effects of accumulated pyoverdine and growth phase on siderophore production. We extend these models to account for this feature and perform a quantitative analysis of the impact of external pyoverdine on growth dynamics of producer and non-producer strains. Moreover, we plan to unravel the molecular mechanisms of pyoverdine production and regulation in P. putida. Specifically, we analyze the presumed individual regulatory circuits and relate their activity to the metabolic state and pyoverdine production under various conditions of iron availability. These analyses will provide a comprehensive picture of the regulatory network and information on cell behavior in different environments. Second, we consider spatially extended systems to understand whether and how spatial structuring impacts cooperative behavior. We investigate how the additional effects of dynamics and regulation of the public goods, and heterogeneity in bacterial mobility affect the emergence of cooperative behavior. Our theoretical studies rely on lattice gas models, which we analyze employing stochastic simulations and analytic approaches. Experiments are performed with producer/non-producer co-cultures in two distinct settings: a fixed spatial environment with discontinuous expansion to new sites, and a structured environment allowing continuous spreading of public good and cells. The development of the co-culture in space and time are analyzed in various ecological conditions


References:

  • List of publications (H. Jung)
  • List of publications (E. Frey)

Contact details:


Prof. Dr. Heinrich Jung
Biozentrum
Department Biologie I, Mikrobiologie
Ludwig-Maximilians-Universität München
Grosshaderner Strasse 2-4
D-82152 Planegg-Martinsried
Tel.: +49-(0)89-2180-74630
Fax: +49-(0)89-2180-74631
hjung(at)lmu.de
Homepage Link



Prof. Dr. Erwin Frey
Arnold-Sommerfeld-Cente for Theoretical Physics
Ludwig-Maximillians-Universität
Theresienstrasse 37
D-80333 München
Tel.: +49-(0)89-2180-4538
Fax: +49-(0)89-2180-4154
frey(at)lmu.de
Homepage Link


Co-workers:

  • Becker, Felix (Dipl.-Ing., PhD student, H. Jung lab)
  • Eder, Michelle (Technician, H. Jung lab)

 


References:


Jung


Wienand, K., Lechner, M., Becker, F., Jung, H. and Frey, E. (2015) Non-Selective Evolution of Growing Populations. PLoS ONE, 10, e0134300.


Frey


Mader, A., Bronk, B. v., Ewald, B., Kesel, S., Schnetz, K., Frey, E. and Opitz, M. (2015) Amount of colicin release in Escherichia coli is regulated by lysis gene expression of the colicin E2 operon. PLoS ONE, 10, e0119124.

Melbinger, A., Cremer, J. and Frey, E. (2015) The emergence of cooperation from a single mutant during microbial life cycles. J R Soc Interface, 12.

Wienand, K., Lechner, M., Becker, F., Jung, H. and Frey, E. (2015) Non-Selective Evolution of Growing Populations. PLoS ONE, 10, e0134300.

Weber, M. F., Poxleitner, G., Hebisch, E., Frey, E. and Opitz, M. (2014) Chemical warfare and survival strategies in bacterial range expansions. J R Soc Interface, 11, 20140172.

Rulands, S., Jahn, D. and Frey, E. (2014) Specialization and bet hedging in heterogeneous populations. Phys. Rev. Lett., 113, 108102.

Hebisch, E., Knebel, J., Landsberg, J., Frey, E. and Leisner, M. (2013) High variation of fluorescence protein maturation times in closely related Escherichia coli strains. PLoS ONE, 8, e75991.

Cremer, J., Melbinger, A. and Frey, E. (2012) Growth dynamics and the evolution of cooperation in microbial populations. Sci Rep, 2, 281.

Melbinger, A., Cremer, J. and Frey, E. (2010) Evolutionary game theory in growing populations. Phys. Rev. Lett., 105, 178101.

Leisner, M., Kuhr, J.-T., Rädler, J. O., Frey, E. and Maier, B. (2009) Kinetics of genetic switching into the state of bacterial competence. Biophys. J., 96, 1178-1188.

Leisner, M., Stingl, K., Frey, E. and Maier, B. (2008) Stochastic switching to competence. Curr. Opin. Microbiol., 11, 553-559.