2016
2015
Yousef, K. P., Streck, A., Schütte, C., Siebert, H., Hengge, R. and Kleist, M. v. (2015) Logical-continuous modelling of post-translationally regulated bistability of curli fiber expression in Escherichia coli. BMC Syst Biol, 9, 39.
Wienand, K., Lechner, M., Becker, F., Jung, H. and Frey, E. (2015) Non-Selective Evolution of Growing Populations. PLoS ONE, 10, e0134300.
Schuhmacher, J. S., Rossmann, F., Dempwolff, F., Knauer, C., Altegoer, F., Steinchen, W., Dörrich, A. K., Klingl, A., Stephan, M., Linne, U., Thormann, K. M. and Bange, G. (2015) MinD-like ATPase FlhG effects location and number of bacterial flagella during C-ring assembly. Proc. Natl. Acad. Sci. U.S.A., 112, 3092-3097.
Schneider, J., Klein, T., Mielich-Süss, B., Koch, G., Franke, C., Kuipers, O. P., Kovács, Á. T., Sauer, M. and Lopez, D. (2015) Spatio-temporal remodeling of functional membrane microdomains organizes the signaling networks of a bacterium. PLoS Genet., 11, e1005140.
Schlüter, J.-P., Czuppon, P., Schauer, O., Pfaffelhuber, P., McIntosh, M. and Becker, A. (2015) Classification of phenotypic subpopulations in isogenic bacterial cultures by triple promoter probing at single cell level. J. Biotechnol., 198, 3-14.
Rossmann, F. S., Racek, T., Wobser, D., Puchalka, J., Rabener, E. M., Reiger, M., Hendrickx, A. P. A., Diederich, A.-K., Jung, K., Klein, C. and Huebner, J. (2015) Phage-mediated Dispersal of Biofilm and Distribution of Bacterial Virulence Genes Is Induced by Quorum Sensing. PLoS Pathog., 11, e1004653.
Reiger, M., Lassak, J. and Jung, K. (2015) Deciphering the role of the type II glyoxalase isoenzyme YcbL (GlxII-2) in Escherichia coli. FEMS Microbiol. Lett., 362, 1-7.
Plener, L., Lorenz, N., Reiger, M., Ramalho, T., Gerland, U. and Jung, K. (2015) The phosphorylation flow of the Vibrio harveyi quorum-sensing cascade determines levels of phenotypic heterogeneity in the population. J. Bacteriol., 197, 1747-1756.
Pande, S., Shitut, S., Freund, L., Westermann, M., Bertels, F., Colesie, C., Bischofs, I. B. and Kost, C. (2015) Metabolic cross-feeding via intercellular nanotubes among bacteria. Nat Commun, 6, 6238.
Nedialkova, L. P., Sidstedt, M., Koeppel, M. B., Spriewald, S., Ring, D., Gerlach, R. G., Bossi, L. and Stecher, B. (2015) Temperate phages promote colicin-dependent fitness of Salmonella enterica serovar Typhimurium. Environ. Microbiol.
Nanda, A. M., Thormann, K. M. and Frunzke, J. (2015) Impact of spontaneous prophage induction on the fitness of bacterial populations and host-microbe interactions. J. Bacteriol., 197, 410-419.
Münch, K. M., Müller, J., Wienecke, S., Bergmann, S., Heyber, S., Biedendieck, R., Münch, R. and Jahn, D. (2015) Polar Fixation of Plasmids during Recombinant Protein Production in Bacillus megaterium Results in Population Heterogeneity. Appl. Environ. Microbiol., 81, 5976-5986.
Melbinger, A., Cremer, J. and Frey, E. (2015) The emergence of cooperation from a single mutant during microbial life cycles. J R Soc Interface, 12.
Mader, A., Bronk, B. v., Ewald, B., Kesel, S., Schnetz, K., Frey, E. and Opitz, M. (2015) Amount of colicin release in Escherichia coli is regulated by lysis gene expression of the colicin E2 operon. PLoS ONE, 10, e0119124.
Hölscher, T., Bartels, B., Lin, Y.-C., Gallegos-Monterrosa, R., Price-Whelan, A., Kolter, R., Dietrich, L. E. P. and Kovács, Á. T. (2015) Motility, Chemotaxis and Aerotaxis Contribute to Competitiveness during Bacterial Pellicle Biofilm Development. J. Mol. Biol.
Höfler, C., Heckmann, J., Fritsch, A., Popp, P., Gebhard, S., Fritz, G. and Mascher, T. (2015) Cannibalism Stress Response in Bacillus subtilis. Microbiology (Reading, Engl.).
Helfrich, S., Pfeifer, E., Krämer, C., Sachs, C. C., Wiechert, W., Kohlheyer, D., Nöh, K. and Frunzke, J. (2015a) Live cell imaging of SOS and prophage dynamics in isogenic bacterial populations. Mol. Microbiol.
Helfrich, S., Azzouzi, C. E., Probst, C., Seiffarth, J., Grünberger, A., Wiechert, W., Kohlheyer, D. and Nöh, K. (2015b) Vizardous: interactive analysis of microbial populations with single cell resolution. Bioinformatics.
Grünberger, A., Probst, C., Helfrich, S., Nanda, A., Stute, B., Wiechert, W., Lieres, E. v., Nöh, K., Frunzke, J. and Kohlheyer, D. (2015) Spatiotemporal microbial single-cell analysis using a high-throughput microfluidics cultivation platform. Cytometry A.
Grote, J., Krysciak, D. and Streit, W. R. (2015) Phenotypic Heterogeneity, a Phenomenon That May Explain Why Quorum Sensing Does Not Always Result in Truly Homogenous Cell Behavior. Appl. Environ. Microbiol., 81, 5280-5289.
Grau, R. R., de Oña, P., Kunert, M., Leñini, C., Gallegos-Monterrosa, R., Mhatre, E., Vileta, D., Donato, V., Hölscher, T., Boland, W., Kuipers, O. P. and Kovács, Á. T. (2015) A Duo of Potassium-Responsive Histidine Kinases Govern the Multicellular Destiny of Bacillus subtilis. MBio, 6.
Glaeser, A. and Heermann, R. (2015) A novel tool for stable genomic reporter gene integration to analyze heterogeneity in Photorhabdus luminescens at the single-cell level. BioTechniques, 59, 74-81.
Fritz, G., Dintner, S., Treichel, N. S., Radeck, J., Gerland, U., Mascher, T. and Gebhard, S. (2015) A New Way of Sensing: Need-Based Activation of Antibiotic Resistance by a Flux-Sensing Mechanism. MBio, 6, e00975.
Donovan, C., Heyer, A., Pfeifer, E., Polen, T., Wittmann, A., Krämer, R., Frunzke, J. and Bramkamp, M. (2015) A prophage-encoded actin-like protein required for efficient viral DNA replication in bacteria. Nucleic Acids Res., 43, 5002-5016.
2014
Yepes, A., Koch, G., Waldvogel, A., Garcia-Betancur, J.-C. and Lopez, D. (2014) Reconstruction of mreB Expression in Staphylococcus aureus via a Collection of New Integrative Plasmids. Appl. Environ. Microbiol., 80, 3868-3878.
Weber, M. F., Poxleitner, G., Hebisch, E., Frey, E. and Opitz, M. (2014) Chemical warfare and survival strategies in bacterial range expansions. J R Soc Interface, 11, 20140172.
van Gestel, J., Weissing, F. J., Kuipers, O. P. and Kovács, A. T. (2014) Density of founder cells affects spatial pattern formation and cooperation in Bacillus subtilis biofilms. ISME J, 8, 2069-2079.
Unthan, S., Grünberger, A., van Ooyen, J., Gätgens, J., Heinrich, J., Paczia, N., Wiechert, W., Kohlheyer, D. and Noack, S. (2014) Beyond growth rate 0.6: What drives Corynebacterium glutamicum to higher growth rates in defined medium. Biotechnol. Bioeng., 111, 359-371.
Trauth, S. and Bischofs, I. B. (2014) Ectopic integration vectors for generating fluorescent promoter fusions in Bacillus subtilis with minimal dark noise. PLoS ONE, 9, e98360.
Serra, D. O. and Hengge, R. (2014) Stress responses go three dimensional - the spatial order of physiological differentiation in bacterial macrocolony biofilms. Environ. Microbiol., 16, 1455-1471.
Schell, U., Kessler, A. and Hilbi, H. (2014) Phosphorylation signalling through the Legionella quorum sensing histidine kinases LqsS and LqsT converges on the response regulator LqsR. Mol. Microbiol., 92, 1039-1055.
Rulands, S., Jahn, D. and Frey, E. (2014) Specialization and bet hedging in heterogeneous populations. Phys. Rev. Lett., 113, 108102.
Rothhardt, J. E., Kröger, C., Broadley, S. P. and Fuchs, T. M. (2014) The orphan regulator ReiD of Salmonella enterica is essential for myo-inositol utilization. Mol. Microbiol., 94, 700-712.
Roselius, L., Langemann, D., Müller, J., Hense, B. A., Filges, S., Jahn, D. and Münch, R. (2014) Modelling and analysis of a gene-regulatory feed-forward loop with basal expression of the second regulator. J. Theor. Biol., 363C, 290-299.
Pande, S., Merker, H., Bohl, K., Reichelt, M., Schuster, S., de Figueiredo, L. F., Kaleta, C. and Kost, C. (2014) Fitness and stability of obligate cross-feeding interactions that emerge upon gene loss in bacteria. ISME J, 8, 953-962.
Nedialkova, L. P., Denzler, R., Koeppel, M. B., Diehl, M., Ring, D., Wille, T., Gerlach, R. G. and Stecher, B. (2014) Inflammation fuels colicin Ib-dependent competition of Salmonella serovar Typhimurium and E. coli in enterobacterial blooms. PLoS Pathog., 10, e1003844.
Nanda, A. M., Heyer, A., Krämer, C., Grünberger, A., Kohlheyer, D. and Frunzke, J. (2014) Analysis of SOS-induced spontaneous prophage induction in Corynebacterium glutamicum at the single-cell level. J. Bacteriol., 196, 180-188.
Mustafi, N., Grünberger, A., Mahr, R., Helfrich, S., Nöh, K., Blombach, B., Kohlheyer, D. and Frunzke, J. (2014) Application of a genetically encoded biosensor for live cell imaging of L-valine production in pyruvate dehydrogenase complex-deficient Corynebacterium glutamicum strains. PLoS ONE, 9, e85731.
Krysciak, D., Grote, J., Rodriguez Orbegoso, M., Utpatel, C., Förstner, K. U., Li, L., Schmeisser, C., Krishnan, H. B. and Streit, W. R. (2014) RNA-seq in the broad host range strain Sinorhizobium fredii NGR234 identifies a large set of genes linked to quorum sensing-dependent regulation in the background of a traI and ngrI deletion mutant. Appl. Environ. Microbiol.
Kovács, A. T. (2014) Impact of spatial distribution on the development of mutualism in microbes. Front Microbiol, 5, 649.
Koch, G., Yepes, A., Förstner, K. U., Wermser, C., Stengel, S. T., Modamio, J., Ohlsen, K., Foster, K. R. and Lopez, D. (2014) Evolution of resistance to a last-resort antibiotic in Staphylococcus aureus via bacterial competition. Cell, 158, 1060-1071.
Grünberger, A., Wiechert, W. and Kohlheyer, D. (2014) Single-cell microfluidics: opportunity for bioprocess development. Curr. Opin. Biotechnol., 29C, 15-23.
Grote, J., Krysciak, D., Schorn, A., Dahlke, R. I., Soonvald, L., Müller, J., Hense, B. A., Schwarzfischer, M., Sauter, M., Schmeisser, C. and Streit, W. R. (2014) Evidence of autoinducer-dependent and autoinducer-independent heterogeneous gene expression in Sinorhizobium fredii NGR234. Appl. Environ. Microbiol.
Gerwig, J. and Stülke, J. (2014) Far from being well understood: multiple protein phosphorylation events control cell differentiation in Bacillus subtilis at different levels. Front Microbiol, 5, 704.
Gerwig, J., Kiley, T. B., Gunka, K., Stanley-Wall, N. and Stülke, J. (2014) The protein tyrosine kinases EpsB and PtkA differentially affect biofilm formation in Bacillus subtilis. Microbiology (Reading, Engl.), 160, 682-691.
Fritz, G., Megerle, J. A., Westermayer, S. A., Brick, D., Heermann, R., Jung, K., Rädler, J. O. and Gerland, U. (2014) Single cell kinetics of phenotypic switching in the arabinose utilization system of E. coli. PLoS ONE, 9, e89532.
Fritz, G. and Mascher, T. (2014) A balancing act times two: sensing and regulating cell envelope homeostasis in Bacillus subtilis. Mol. Microbiol., 94, 1201-1207.
D'Souza, G., Waschina, S., Pande, S., Bohl, K., Kaleta, C. and Kost, C. (2014) Less is more: selective advantages can explain the prevalent loss of biosynthetic genes in bacteria. Evolution, 68, 2559-2570.
Drees, B., Reiger, M., Jung, K. and Bischofs, I. B. (2014) A modular view of the diversity of cell-density-encoding schemes in bacterial quorum-sensing systems. Biophys. J., 107, 266-277.
Domínguez-Escobar, J., Wolf, D., Fritz, G., Höfler, C., Wedlich-Söldner, R. and Mascher, T. (2014) Subcellular localization, interactions and dynamics of the phage-shock protein-like Lia response in Bacillus subtilis. Mol. Microbiol., 92, 716-732.
Diethmaier, C., Newman, J. A., Kovács, A. T., Kaever, V., Herzberg, C., Rodrigues, C., Boonstra, M., Kuipers, O. P., Lewis, R. J. and Stülke, J. (2014) The YmdB phosphodiesterase is a global regulator of late adaptive responses in Bacillus subtilis. J. Bacteriol., 196, 265-275.
Charoenpanich, P., Soto, M. J., Becker, A. and McIntosh, M. (2014) Quorum sensing restrains growth and is rapidly inactivated during domestication of Sinorhizobium meliloti. Environ Microbiol Rep.
Bubendorfer, S., Koltai, M., Rossmann, F., Sourjik, V. and Thormann, K. M. (2014) Secondary bacterial flagellar system improves bacterial spreading by increasing the directional persistence of swimming. Proc. Natl. Acad. Sci. U.S.A., 111, 11485-11490.
Brameyer, S., Kresovic, D., Bode, H. B. and Heermann, R. (2014) Dialkylresorcinols as bacterial signaling molecules. Proc. Natl. Acad. Sci. U.S.A.
Bertram, R. and Schuster, C. F. (2014) Post-transcriptional regulation of gene expression in bacterial pathogens by toxin-antitoxin systems. Front Cell Infect Microbiol, 4, 6.
2013
Stecher, B., Maier, L. and Hardt, W.-D. (2013) 'Blooming' in the gut: how dysbiosis might contribute to pathogen evolution. Nat. Rev. Microbiol., 11, 277-284.
Serra, D. O., Richter, A. M., Klauck, G., Mika, F. and Hengge, R. (2013a) Microanatomy at cellular resolution and spatial order of physiological differentiation in a bacterial biofilm. MBio, 4, e00103-00113.
Serra, D. O., Richter, A. M. and Hengge, R. (2013b) Cellulose as an architectural element in spatially structured Escherichia coli biofilms. J. Bacteriol., 195, 5540-5554.
Schuster, C. F. and Bertram, R. (2013) Toxin-antitoxin systems are ubiquitous and versatile modulators of prokaryotic cell fate. FEMS Microbiol. Lett., 340, 73-85.
Schoenfelder, S. M. K., Marincola, G., Geiger, T., Goerke, C., Wolz, C. and Ziebuhr, W. (2013) Methionine biosynthesis in Staphylococcus aureus is tightly controlled by a hierarchical network involving an initiator tRNA-specific T-box riboswitch. PLoS Pathog., 9, e1003606.
Probst, C., Grünberger, A., Wiechert, W. and Kohlheyer, D. (2013a) Polydimethylsiloxane (PDMS) Sub-Micron Traps for Single-Cell Analysis of Bacteria. Micromachines, 4, 357-369.
Probst, C., Grünberger, A., Wiechert, W. and Kohlheyer, D. (2013b) Microfluidic growth chambers with optical tweezers for full spatial single-cell control and analysis of evolving microbes. J. Microbiol. Methods, 95, 470-476.
Nolle, N., Schuster, C. F. and Bertram, R. (2013) Two paralogous yefM-yoeB loci from Staphylococcus equorum encode functional toxin-antitoxin systems. Microbiology (Reading, Engl.), 159, 1575-1585.
Neumeyer, A., Hübschmann, T., Müller, S. and Frunzke, J. (2013) Monitoring of population dynamics of Corynebacterium glutamicum by multiparameter flow cytometry. Microb Biotechnol, 6, 157-167.
Mielich-Süss, B., Schneider, J. and Lopez, D. (2013) Overproduction of flotillin influences cell differentiation and shape in Bacillus subtilis. MBio, 4, e00719-00713.
Maier, L., Vyas, R., Cordova, C. D., Lindsay, H., Schmidt, T. S. B., Brugiroux, S., Periaswamy, B., Bauer, R., Sturm, A., Schreiber, F., von Mering, C., Robinson, M. D., Stecher, B. and Hardt, W.-D. (2013) Microbiota-derived hydrogen fuels Salmonella typhimurium invasion of the gut ecosystem. Cell Host Microbe, 14, 641-651.
Kesel, S., Mader, A., Höfler, C., Mascher, T. and Leisner, M. (2013) Immediate and Heterogeneous Response of the LiaFSR Two-Component System of Bacillus subtilis to the Peptide Antibiotic Bacitracin. PLoS ONE, 8, e53457.
Hornung, C., Poehlein, A., Haack, F. S., Schmidt, M., Dierking, K., Pohlen, A., Schulenburg, H., Blokesch, M., Plener, L., Jung, K., Bonge, A., Krohn-Molt, I., Utpatel, C., Timmermann, G., Spieck, E., Pommerening-Röser, A., Bode, E., Bode, H. B., Daniel, R., Schmeisser, C. and Streit, W. R. (2013) The Janthinobacterium sp. HH01 genome encodes a homologue of the V. cholerae CqsA and L. pneumophila LqsA autoinducer synthases. PLoS ONE, 8, e55045.
Hentschel, E., Will, C., Mustafi, N., Burkovski, A., Rehm, N. and Frunzke, J. (2013) Destabilized eYFP variants for dynamic gene expression studies in Corynebacterium glutamicum. Microb Biotechnol, 6, 196-201.
Hebisch, E., Knebel, J., Landsberg, J., Frey, E. and Leisner, M. (2013) High variation of fluorescence protein maturation times in closely related Escherichia coli strains. PLoS ONE, 8, e75991.
Chu, Y.-Y., Nega, M., Wölfle, M., Plener, L., Grond, S., Jung, K. and Götz, F. (2013) A New Class of Quorum Quenching Molecules from Staphylococcus Species Affects Communication and Growth of Gram-Negative Bacteria. PLoS Pathog., 9, e1003654.
Charoenpanich, P., Meyer, S., Becker, A. and McIntosh, M. (2013) Temporal expression program of quorum sensing-based transcription regulation in Sinorhizobium meliloti. J. Bacteriol., 195, 3224-3236.
Brachmann, A. O., Brameyer, S., Kresovic, D., Hitkova, I., Kopp, Y., Manske, C., Schubert, K., Bode, H. B. and Heermann, R. (2013) Pyrones as bacterial signaling molecules. Nat. Chem. Biol., 9, 573-578.
Berry, D., Stecher, B., Schintlmeister, A., Reichert, J., Brugiroux, S., Wild, B., Wanek, W., Richter, A., Rauch, I., Decker, T., Loy, A. and Wagner, M. (2013) Host-compound foraging by intestinal microbiota revealed by single-cell stable isotope probing. Proc. Natl. Acad. Sci. U.S.A., 110, 4720-4725.
Baumgart, M., Unthan, S., Rückert, C., Sivalingam, J., Grünberger, A., Kalinowski, J., Bott, M., Noack, S. and Frunzke, J. (2013) Construction of a Prophage-Free Variant of Corynebacterium glutamicum ATCC 13032 for Use as a Platform Strain for Basic Research and Industrial Biotechnology. Appl. Environ. Microbiol., 79, 6006-6015.
2012
Yepes, A., Schneider, J., Mielich, B., Koch, G., García-Betancur, J.-C., Ramamurthi, K. S., Vlamakis, H. and López, D. (2012) The biofilm formation defect of a Bacillus subtilis flotillin-defective mutant involves the protease FtsH. Mol. Microbiol., 86, 457-471.
Tiaden, A. and Hilbi, H. (2012) α-Hydroxyketone synthesis and sensing by Legionella and Vibrio. Sensors (Basel), 12, 2899-2919.
Stratmann, T., Pul, Ü., Wurm, R., Wagner, R. and Schnetz, K. (2012) RcsB-BglJ activates the Escherichia coli leuO gene, encoding an H-NS antagonist and pleiotropic regulator of virulence determinants. Mol. Microbiol., 83, 1109-1123.
Stecher, B., Denzler, R., Maier, L., Bernet, F., Sanders, M. J., Pickard, D. J., Barthel, M., Westendorf, A. M., Krogfelt, K. A., Walker, A. W., Ackermann, M., Dobrindt, U., Thomson, N. R. and Hardt, W.-D. (2012) Gut inflammation can boost horizontal gene transfer between pathogenic and commensal Enterobacteriaceae. Proc. Natl. Acad. Sci. U.S.A., 109, 1269-1274.
Schuldes, J., Rodriguez Orbegoso, M., Schmeisser, C., Krishnan, H. B., Daniel, R. and Streit, W. R. (2012) Complete genome sequence of the broad-host-range strain Sinorhizobium fredii USDA257. J. Bacteriol., 194, 4483.
Schneider, J., Yepes, A., Garcia-Betancur, J. C., Westedt, I., Mielich, B. and López, D. (2012) Streptomycin-induced expression in Bacillus subtilis of YtnP, a lactonase-homologous protein that inhibits development and streptomycin production in Streptomyces griseus. Appl. Environ. Microbiol., 78, 599-603.
Quade, N., Mendonca, C., Herbst, K., Heroven, A. K., Ritter, C., Heinz, D. W. and Dersch, P. (2012) Structural basis for intrinsic thermosensing by the master virulence regulator RovA of Yersinia. J. Biol. Chem.
Neumann, S., Grosse, K. and Sourjik, V. (2012) Chemotactic signaling via carbohydrate phosphotransferase systems in Escherichia coli. Proc. Natl. Acad. Sci. U.S.A.
Marbach, A. and Bettenbrock, K. (2012) lac operon induction in Escherichia coli: Systematic comparison of IPTG and TMG induction and influence of the transacetylase LacA. J. Biotechnol., 157, 82-88.
Loetscher, Y., Wieser, A., Lengefeld, J., Kaiser, P., Schubert, S., Heikenwalder, M., Hardt, W.-D. and Stecher, B. (2012) Salmonella transiently reside in luminal neutrophils in the inflamed gut. PLoS ONE, 7, e34812.
Lechner, S., Patra, P., Klumpp, S. and Bertram, R. (2012) Interplay between population dynamics and drug tolerance of Staphylococcus aureus persister cells. J. Mol. Microbiol. Biotechnol., 22, 381-391.
Lalaouna, D., Fochesato, S., Sanchez, L., Schmitt-Kopplin, P., Haas, D., Heulin, T. and Achouak, W. (2012) Phenotypic switching in Pseudomonas brassicacearum involves GacS- and GacA-dependent Rsm small RNAs. Appl. Environ. Microbiol., 78, 1658-1665.
Klein, J., Leupold, S., Biegler, I., Biedendieck, R., Münch, R. and Jahn, D. (2012) TLM-Tracker: Software for cell segmentation, tracking and lineage analysis in time-lapse microscopy movies. Bioinformatics, 28, 2276-2277.
Kessler, A., Schell, U., Sahr, T., Tiaden, A., Harrison, C., Buchrieser, C. and Hilbi, H. (2012) The Legionella pneumophila orphan sensor kinase LqsT regulates competence and pathogen-host interactions as a component of the LAI-1 circuit. Environ. Microbiol.
Heroven, A. K., Böhme, K. and Dersch, P. (2012) The Csr/Rsm system of Yersinia and related pathogens: A post-transcriptional strategy for managing virulence. RNA Biol, 9, 379-391.
Hense, B. A., Müller, J., Kuttler, C. and Hartmann, A. (2012) Spatial heterogeneity of autoinducer regulation systems. Sensors (Basel), 12, 4156-4171.
Grünberger, A., van Ooyen, J., Paczia, N., Rohe, P., Schiendzielorz, G., Eggeling, L., Wiechert, W., Kohlheyer, D. and Noack, S. (2012a) Beyond growth rate 0.6: Corynebacterium glutamicum cultivated in highly diluted environments. Biotechnol. Bioeng.
Grünberger, A., Paczia, N., Probst, C., Schendzielorz, G., Eggeling, L., Noack, S., Wiechert, W. and Kohlheyer, D. (2012b) A disposable picolitre bioreactor for cultivation and investigation of industrially relevant bacteria on the single cell level. Lab Chip, 12, 2060-2068.
Cremer, J., Melbinger, A. and Frey, E. (2012) Growth dynamics and the evolution of cooperation in microbial populations. Sci Rep, 2, 281.
Cataldi, T. R. I., Bianco, G., Fonseca, J. and Schmitt-Kopplin, P. (2012) Perceiving the chemical language of Gram-negative bacteria: listening by high-resolution mass spectrometry. Anal Bioanal Chem.
Bubendorfer, S., Held, S., Windel, N., Paulick, A., Klingl, A. and Thormann, K. M. (2012) Specificity of motor components in the dual flagellar system of Shewanella putrefaciens CN-32. Mol. Microbiol., 83, 335-350.
Bertels, F., Merker, H. and Kost, C. (2012) Design and characterization of auxotrophy-based amino acid biosensors. PLoS ONE, 7, e41349.
Anetzberger, C., Schell, U. and Jung, K. (2012a) Single cell analysis of Vibrio harveyi uncovers functional heterogeneity in response to quorum sensing signals. BMC Microbiol., 12, 209.
Anetzberger, C., Reiger, M., Fekete, A., Schell, U., Stambrau, N., Plener, L., Kopka, J., Schmitt-Kopplin, P., Hilbi, H. and Jung, K. (2012b) Autoinducers Act as Biological Timers in Vibrio harveyi. PLoS ONE, 7, e48310.
2011
Steuer, R., Waldherr, S., Sourjik, V. and Kollmann, M. (2011) Robust signal processing in living cells. PLoS Comput. Biol., 7, e1002218.
Stecher, B. and Hardt, W.-D. (2011) Mechanisms controlling pathogen colonization of the gut. Curr. Opin. Microbiol., 14, 82-91.
Schulmeister, S., Grosse, K. and Sourjik, V. (2011) Effects of receptor modification and temperature on dynamics of sensory complexes in Escherichia coli chemotaxis. BMC Microbiol., 11, 222.
Schue, M., Fekete, A., Ortet, P., Brutesco, C., Heulin, T., Schmitt-Kopplin, P., Achouak, W. and Santaella, C. (2011) Modulation of metabolism and switching to biofilm prevail over exopolysaccharide production in the response of Rhizobium alamii to cadmium. PLoS ONE, 6, e26771.
Rani, S., Kumar, A., Malik, A. K. and Schmitt-Kopplin, P. (2011) Occurrence of N-Acyl Homoserine Lactones in Extracts of Bacterial Strain of Pseudomonas aeruginosa and in Sputum Sample Evaluated by Gas Chromatography-Mass Spectrometry. American Journal of Analytical Chemistry, 2, 294-302.
Rainey, P. B., Beaumont, H. J. E., Ferguson, G. C., Gallie, J., Kost, C., Libby, E. and Zhang, X.-X. (2011) The evolutionary emergence of stochastic phenotype switching in bacteria. Microb. Cell Fact., 10 Suppl 1, S14.
Oleksiuk, O., Jakovljevic, V., Vladimirov, N., Carvalho, R., Paster, E., Ryu, W. S., Meir, Y., Wingreen, N. S., Kollmann, M. and Sourjik, V. (2011) Thermal robustness of signaling in bacterial chemotaxis. Cell, 145, 312-321.
Münch, R., Klein, J. and Jahn, D. (2011) Prediction and analysis of gene regulatory networks in prokaryotic genomes. In Systems and Computational Biology - Molecular and Cellular Experimental SystemsInTech, Rijeka, Croatia, pp. 149-162.
Maier, B. (2011) Competence and Transformation. In Bacillus: Cellular and Molecular BiologyCaister University Press, 2nd edition.
Krysciak, D., Schmeisser, C., Preuss, S., Riethausen, J., Quitschau, M., Grond, S. and Streit, W. R. (2011) Involvement of multiple loci in quorum quenching of autoinducer I molecules in the nitrogen-fixing symbiont Rhizobium (Sinorhizobium) sp. strain NGR234. Appl. Environ. Microbiol., 77, 5089-5099.
Kröger, C., Srikumar, S., Ellwart, J. and Fuchs, T. M. (2011) Bistability in myo-inositol utilization by Salmonella enterica serovar Typhimurium. J. Bacteriol., 193, 1427-1435.
Jung, K. (2011) Microbiology: tuning communication fidelity. Nat. Chem. Biol., 7, 502-503.
Hou, B.-H., Takanaga, H., Grossmann, G., Chen, L.-Q., Qu, X.-Q., Jones, A. M., Lalonde, S., Schweissgut, O., Wiechert, W. and Frommer, W. B. (2011) Optical sensors for monitoring dynamic changes of intracellular metabolite levels in mammalian cells. Nat Protoc, 6, 1818-1833.
Diethmaier, C., Pietack, N., Gunka, K., Wrede, C., Lehnik-Habrink, M., Herzberg, C., Hübner, S. and Stülke, J. (2011) A novel factor controlling bistability in Bacillus subtilis: the YmdB protein affects flagellin expression and biofilm formation. J. Bacteriol., 193, 5997-6007.
Brito-Echeverría, J., Lucio, M., López-López, A., Antón, J., Schmitt-Kopplin, P. and Rosselló-Móra, R. (2011) Response to adverse conditions in two strains of the extremely halophilic species Salinibacter ruber. Extremophiles, 15, 379-389.
2010
Wolf, D., Kalamorz, F., Wecke, T., Juszczak, A., Mäder, U., Homuth, G., Jordan, S., Kirstein, J., Hoppert, M., Voigt, B., Hecker, M. and Mascher, T. (2010) In-depth profiling of the LiaR response of Bacillus subtilis. J. Bacteriol., 192, 4680-4693.
Weisser, M., Schoenfelder, S. M. K., Orasch, C., Arber, C., Gratwohl, A., Frei, R., Eckart, M., Flückiger, U. and Ziebuhr, W. (2010) Hypervariability of biofilm formation and oxacillin resistance in a Staphylococcus epidermidis strain causing persistent severe infection in an immunocompromised patient. J. Clin. Microbiol., 48, 2407-2412.
Vladimirov, N., Lebiedz, D. and Sourjik, V. (2010) Predicted auxiliary navigation mechanism of peritrichously flagellated chemotactic bacteria. PLoS Comput. Biol., 6, e1000717.
Venkatesh, G. R., Kembou Koungni, F. C., Paukner, A., Stratmann, T., Blissenbach, B. and Schnetz, K. (2010) BglJ-RcsB heterodimers relieve repression of the Escherichia coli bgl operon by H-NS. J. Bacteriol., 192, 6456-6464.
Tiaden, A., Spirig, T., Sahr, T., Wälti, M. A., Boucke, K., Buchrieser, C. and Hilbi, H. (2010a) The autoinducer synthase LqsA and putative sensor kinase LqsS regulate phagocyte interactions, extracellular filaments and a genomic island of Legionella pneumophila. Environ. Microbiol., 12, 1243-1259.
Tiaden, A., Spirig, T. and Hilbi, H. (2010b) Bacterial gene regulation by alpha-hydroxyketone signaling. Trends Microbiol., 18, 288-297.
Stecher, B., Chaffron, S., Käppeli, R., Hapfelmeier, S., Freedrich, S., Weber, T. C., Kirundi, J., Suar, M., McCoy, K. D., von Mering, C., Macpherson, A. J. and Hardt, W.-D. (2010) Like will to like: abundances of closely related species can predict susceptibility to intestinal colonization by pathogenic and commensal bacteria. PLoS Pathog., 6, e1000711.
Stammen, S., Müller, B. K., Korneli, C., Biedendieck, R., Gamer, M., Franco-Lara, E. and Jahn, D. (2010) High-yield intra- and extracellular protein production using Bacillus megaterium. Appl. Environ. Microbiol., 76, 4037-4046.
Schoenfelder, S. M. K., Lange, C., Eckart, M., Hennig, S., Kozytska, S. and Ziebuhr, W. (2010) Success through diversity - how Staphylococcus epidermidis establishes as a nosocomial pathogen. Int. J. Med. Microbiol., 300, 380-386.
Melbinger, A., Cremer, J. and Frey, E. (2010) Evolutionary game theory in growing populations. Phys. Rev. Lett., 105, 178101.
Kröger, C., Stolz, J. and Fuchs, T. M. (2010) myo-Inositol transport by Salmonella enterica serovar Typhimurium. Microbiology (Reading, Engl.), 156, 128-138.
Kalinin, Y., Neumann, S., Sourjik, V. and Wu, M. (2010) Responses of Escherichia coli bacteria to two opposing chemoattractant gradients depend on the chemoreceptor ratio. J. Bacteriol., 192, 1796-1800.
Fekete, A., Rothballer, M., Hartmann, A. and Schmitt-Kopplin, P. (2010a) Identification of bacterial autoinducers. In Bacterial SignalingWiley Publishers, Weinheim, Germany, pp. 95-111.
Fekete, A., Kuttler, C., Rothballer, M., Hense, B. A., Fischer, D., Buddrus-Schiemann, K., Lucio, M., Müller, J., Schmitt-Kopplin, P. and Hartmann, A. (2010b) Dynamic regulation of N-acyl-homoserine lactone production and degradation in Pseudomonas putida IsoF. FEMS Microbiol. Ecol., 72, 22-34.
Chen, X., Kremmer, E., Gouzy, M.-F., Clausen, E., Starke, M., Wöllner, K., Pfister, G., Hartmann, A. and Krämer, P. M. (2010a) Development and characterization of rat monoclonal antibodies for N-acylated homoserine lactones. Anal Bioanal Chem, 398, 2655-2667.
Chen, X., Buddrus-Schiemann, K., Rothballer, M., Krämer, P. M. and Hartmann, A. (2010b) Detection of quorum sensing molecules in Burkholderia cepacia culture supernatants with enzyme-linked immunosorbent assays. Anal Bioanal Chem, 398, 2669-2676.
Bunk, B., Schulz, A., Stammen, S., Münch, R., Warren, M. J., Rohde, M., Jahn, D. and Biedendieck, R. (2010) A short story about a big magic bug. Bioeng Bugs, 1, 85-91.
Boehm, A., Kaiser, M., Li, H., Spangler, C., Kasper, C. A., Ackermann, M., Kaever, V., Sourjik, V., Roth, V. and Jenal, U. (2010) Second messenger-mediated adjustment of bacterial swimming velocity. Cell, 141, 107-116.
Best, K. and Pfaffelhuber, P. (2010) The Aldous-Shields model revisited with application to cellular ageing. Elec. Comm. Probab., 15, 14.
2009
Schmeisser, C., Liesegang, H., Krysciak, D., Bakkou, N., Le Quéré, A., Wollherr, A., Heinemeyer, I., Morgenstern, B., Pommerening-Röser, A., Flores, M., Palacios, R., Brenner, S., Gottschalk, G., Schmitz, R. A., Broughton, W. J., Perret, X., Strittmatter, A. W. and Streit, W. R. (2009) Rhizobium sp. strain NGR234 possesses a remarkable number of secretion systems. Appl. Environ. Microbiol., 75, 4035-4045.
Paulick, A., Koerdt, A., Lassak, J., Huntley, S., Wilms, I., Narberhaus, F. and Thormann, K. M. (2009) Two different stator systems drive a single polar flagellum in Shewanella oneidensis MR-1. Mol. Microbiol., 71, 836-850.
McIntosh, M., Meyer, S. and Becker, A. (2009) Novel Sinorhizobium meliloti quorum sensing positive and negative regulatory feedback mechanisms respond to phosphate availability. Mol. Microbiol., 74, 1238-1256.
Løvdok, L., Bentele, K., Vladimirov, N., Müller, A., Pop, F. S., Lebiedz, D., Kollmann, M. and Sourjik, V. (2009) Role of translational coupling in robustness of bacterial chemotaxis pathway. PLoS Biol., 7, e1000171.
López, D., Vlamakis, H., Losick, R. and Kolter, R. (2009a) Paracrine signaling in a bacterium. Genes Dev., 23, 1631-1638.
López, D., Vlamakis, H., Losick, R. and Kolter, R. (2009b) Cannibalism enhances biofilm development in Bacillus subtilis. Mol. Microbiol., 74, 609-618.
López, D., Fischbach, M. A., Chu, F., Losick, R. and Kolter, R. (2009c) Structurally diverse natural products that cause potassium leakage trigger multicellularity in Bacillus subtilis. Proc. Natl. Acad. Sci. U.S.A., 106, 280-285.
Leisner, M., Kuhr, J.-T., Rädler, J. O., Frey, E. and Maier, B. (2009) Kinetics of genetic switching into the state of bacterial competence. Biophys. J., 96, 1178-1188.
Kröger, C. and Fuchs, T. M. (2009) Characterization of the myo-inositol utilization island of Salmonella enterica serovar Typhimurium. J. Bacteriol., 191, 545-554.
Koerdt, A., Paulick, A., Mock, M., Jost, K. and Thormann, K. M. (2009) MotX and MotY are required for flagellar rotation in Shewanella oneidensis MR-1. J. Bacteriol., 191, 5085-5093.
Kentner, D. and Sourjik, V. (2009) Dynamic map of protein interactions in the Escherichia coli chemotaxis pathway. Mol. Syst. Biol., 5, 238.
Herbst, K., Bujara, M., Heroven, A. K., Opitz, W., Weichert, M., Zimmermann, A. and Dersch, P. (2009) Intrinsic thermal sensing controls proteolysis of Yersinia virulence regulator RovA. PLoS Pathog., 5, e1000435.
Bischofs, I., Hug, J. A., Liu, A. W., Wolf, D. M. and Arkin, A. P. (2009) Complexity in bacterial cell-cell communication: quorum signal integration and subpopulation signaling in the Bacillus subtilis phosphorelay. Proc. Natl. Acad. Sci. U.S.A., 106, 6459-6464.
Beaumont, H. J. E., Gallie, J., Kost, C., Ferguson, G. C. and Rainey, P. B. (2009) Experimental evolution of bet hedging. Nature, 462, 90-93.
Anetzberger, C., Pirch, T. and Jung, K. (2009) Heterogeneity in quorum sensing-regulated bioluminescence of Vibrio harveyi. Mol. Microbiol., 73, 267-277.
2008
Wolf, D. M., Fontaine-Bodin, L., Bischofs, I., Price, G., Keasling, J. and Arkin, A. P. (2008) Memory in microbes: quantifying history-dependent behavior in a bacterium. PLoS ONE, 3, e1700.
von Rad, U., Klein, I., Dobrev, P. I., Kottova, J., Zazimalova, E., Fekete, A., Hartmann, A., Schmitt-Kopplin, P. and Durner, J. (2008) Response of Arabidopsis thaliana to N-hexanoyl-DL-homoserine-lactone, a bacterial quorum sensing molecule produced in the rhizosphere. Planta, 229, 73-85.
Tiaden, A., Spirig, T., Carranza, P., Brüggemann, H., Riedel, K., Eberl, L., Buchrieser, C. and Hilbi, H. (2008) Synergistic contribution of the Legionella pneumophila lqs genes to pathogen-host interactions. J. Bacteriol., 190, 7532-7547.
Stratmann, T., Madhusudan, S. and Schnetz, K. (2008) Regulation of the yjjQ-bglJ operon, encoding LuxR-type transcription factors, and the divergent yjjP gene by H-NS and LeuO. J. Bacteriol., 190, 926-935.
Stecher, B. and Hardt, W.-D. (2008) The role of microbiota in infectious disease. Trends Microbiol., 16, 107-114.
Spirig, T., Tiaden, A., Kiefer, P., Buchrieser, C., Vorholt, J. A. and Hilbi, H. (2008) The Legionella autoinducer synthase LqsA produces an alpha-hydroxyketone signaling molecule. J. Biol. Chem., 283, 18113-18123.
Rietkötter, E., Hoyer, D. and Mascher, T. (2008) Bacitracin sensing in Bacillus subtilis. Mol. Microbiol., 68, 768-785.
Münch, A., Stingl, L., Jung, K. and Heermann, R. (2008) Photorhabdus luminescens genes induced upon insect infection. BMC Genomics, 9, 229.
Megerle, J. A., Fritz, G., Gerland, U., Jung, K. and Rädler, J. O. (2008) Timing and dynamics of single cell gene expression in the arabinose utilization system. Biophys. J., 95, 2103-2115.
McIntosh, M., Krol, E. and Becker, A. (2008) Competitive and cooperative effects in quorum-sensing-regulated galactoglucan biosynthesis in Sinorhizobium meliloti. J. Bacteriol., 190, 5308-5317.
Lieres, E. v., Niehoff, C. and Nöh, K. (2008) Particle Tracking and Robust Estimation of Azimuthal Averages from Confocal Laser Scanning Microscopy Data. In 5th European Congress on Computational Methods in Applied Sciences and Engeineering - ECCOMASVenice, Italy.
Leisner, M., Stingl, K., Frey, E. and Maier, B. (2008) Stochastic switching to competence. Curr. Opin. Microbiol., 11, 553-559.
Heroven, A. K., Böhme, K., Rohde, M. and Dersch, P. (2008) A Csr-type regulatory system, including small non-coding RNAs, regulates the global virulence regulator RovA of Yersinia pseudotuberculosis through RovM. Mol. Microbiol., 68, 1179-1195.
Hennig, S. and Ziebuhr, W. (2008) A transposase-independent mechanism gives rise to precise excision of IS256 from insertion sites in Staphylococcus epidermidis. J. Bacteriol., 190, 1488-1490.
Heermann, R. and Fuchs, T. M. (2008) Comparative analysis of the Photorhabdus luminescens and the Yersinia enterocolitica genomes: uncovering candidate genes involved in insect pathogenicity. BMC Genomics, 9, 40.
Frunzke, J., Bramkamp, M., Schweitzer, J.-E. and Bott, M. (2008) Population Heterogeneity in Corynebacterium glutamicum ATCC 13032 caused by prophage CGP3. J. Bacteriol., 190, 5111-5119.
Frunzke, J. and Bott, M. (2008) Regulation of iron homeostasis in Corynebacterium glutamicum. In Corynebacteria: genomics and molecular biologyCaister Academic Press, Norfolk, UK., pp. 241-266.
Freed, N. E., Silander, O. K., Stecher, B., Böhm, A., Hardt, W.-D. and Ackermann, M. (2008) A simple screen to identify promoters conferring high levels of phenotypic noise. PLoS Genet., 4, e1000307.
Bahlawane, C., McIntosh, M., Krol, E. and Becker, A. (2008) Sinorhizobium meliloti regulator MucR couples exopolysaccharide synthesis and motility. Mol. Plant Microbe Interact., 21, 1498-1509.
Ackermann, M., Stecher, B., Freed, N. E., Songhet, P., Hardt, W.-D. and Doebeli, M. (2008) Self-destructive cooperation mediated by phenotypic noise. Nature, 454, 987-990.
2007
Tiaden, A., Spirig, T., Weber, S. S., Brüggemann, H., Bosshard, R., Buchrieser, C. and Hilbi, H. (2007) The Legionella pneumophila response regulator LqsR promotes host cell interactions as an element of the virulence regulatory network controlled by RpoS and LetA. Cell. Microbiol., 9, 2903-2920.
Stecher, B., Robbiani, R., Walker, A. W., Westendorf, A. M., Barthel, M., Kremer, M., Chaffron, S., Macpherson, A. J., Buer, J., Parkhill, J., Dougan, G., von Mering, C. and Hardt, W.-D. (2007) Salmonella enterica serovar typhimurium exploits inflammation to compete with the intestinal microbiota. PLoS Biol., 5, 2177-2189.
Pagès, D., Sanchez, L., Conrod, S., Gidrol, X., Fekete, A., Schmitt-Kopplin, P., Heulin, T. and Achouak, W. (2007) Exploration of intraclonal adaptation mechanisms of Pseudomonas brassicacearum facing cadmium toxicity. Environ. Microbiol., 9, 2820-2835.
Leisner, M., Stingl, K., Rädler, J. O. and Maier, B. (2007) Basal expression rate of comK sets a 'switching-window' into the K-state of Bacillus subtilis. Mol. Microbiol., 63, 1806-1816.
Jordan, S., Rietkötter, E., Strauch, M. A., Kalamorz, F., Butcher, B. G., Helmann, J. D. and Mascher, T. (2007) LiaRS-dependent gene expression is embedded in transition state regulation in Bacillus subtilis. Microbiology (Reading, Engl.), 153, 2530-2540.
Hense, B. A., Kuttler, C., Müller, J., Rothballer, M., Hartmann, A. and Kreft, J.-U. (2007) Does efficiency sensing unify diffusion and quorum sensing? Nat. Rev. Microbiol., 5, 230-239.
Hennig, S., Nyunt Wai, S. and Ziebuhr, W. (2007) Spontaneous switch to PIA-independent biofilm formation in an ica-positive Staphylococcus epidermidis isolate. Int. J. Med. Microbiol., 297, 117-122.
Götz, C., Fekete, A., Gebefuegi, I., Forczek, S. T., Fuksová, K., Li, X., Englmann, M., Gryndler, M., Hartmann, A., Matucha, M., Schmitt-Kopplin, P. and Schröder, P. (2007) Uptake, degradation and chiral discrimination of N-acyl-D/L-homoserine lactones by barley (Hordeum vulgare) and yam bean (Pachyrhizus erosus) plants. Anal Bioanal Chem, 389, 1447-1457.
Fekete, A., Frommberger, M., Rothballer, M., Li, X., Englmann, M., Fekete, J., Hartmann, A., Eberl, L. and Schmitt-Kopplin, P. (2007) Identification of bacterial N-acylhomoserine lactones (AHLs) with a combination of ultra-performance liquid chromatography (UPLC), ultra-high-resolution mass spectrometry, and in-situ biosensors. Anal Bioanal Chem, 387, 455-467.
Englmann, M., Fekete, A., Kuttler, C., Frommberger, M., Li, X., Gebefügi, I., Fekete, J. and Schmitt-Kopplin, P. (2007a) The hydrolysis of unsubstituted N-acylhomoserine lactones to their homoserine metabolites. Analytical approaches using ultra performance liquid chromatography. J Chromatogr A, 1160, 184-193.
Englmann, M., Fekete, A., Gebefügi, I. and Schmitt-Kopplin, P. (2007b) The dosage of small volumes for chromatographic quantifications using a drop-on-demand dispenser system. Anal Bioanal Chem, 388, 1109-1116.
Biedendieck, R., Yang, Y., Deckwer, W.-D., Malten, M. and Jahn, D. (2007) Plasmid system for the intracellular production and purification of affinity-tagged proteins in Bacillus megaterium. Biotechnol. Bioeng., 96, 525-537.
Bettenbrock, K., Sauter, T., Jahreis, K., Kremling, A., Lengeler, J. W. and Gilles, E.-D. (2007) Correlation between growth rates, EIIACrr phosphorylation, and intracellular cyclic AMP levels in Escherichia coli K-12. J. Bacteriol., 189, 6891-6900.
Bartels, F. W., McIntosh, M., Fuhrmann, A., Metzendorf, C., Plattner, P., Sewald, N., Anselmetti, D., Ros, R. and Becker, A. (2007) Effector-stimulated single molecule protein-DNA interactions of a quorum-sensing system in Sinorhizobium meliloti. Biophys. J., 92, 4391-4400.
2006
Pfaffelhuber, P., Haubold, B. and Wakolbinger, A. (2006) Approximate genealogies under genetic hitchhiking. Genetics, 174, 1995-2008.
Nöh, K., Wahl, A. and Wiechert, W. (2006) Computational tools for isotopically instationary 13C labeling experiments under metabolic steady state conditions. Metab. Eng., 8, 554-577.
Li, X., Fekete, A., Englmann, M., Götz, C., Rothballer, M., Frommberger, M., Buddrus, K., Fekete, J., Cai, C., Schröder, P., Hartmann, A., Chen, G. and Schmitt-Kopplin, P. (2006) Development and application of a method for the analysis of N-acylhomoserine lactones by solid-phase extraction and ultra high pressure liquid chromatography. J Chromatogr A, 1134, 186-193.
Jordan, S., Junker, A., Helmann, J. D. and Mascher, T. (2006) Regulation of LiaRS-dependent gene expression in Bacillus subtilis: identification of inhibitor proteins, regulator binding sites, and target genes of a conserved cell envelope stress-sensing two-component system. J. Bacteriol., 188, 5153-5166.
Bettenbrock, K., Fischer, S., Kremling, A., Jahreis, K., Sauter, T. and Gilles, E.-D. (2006) A quantitative approach to catabolite repression in Escherichia coli. J. Biol. Chem., 281, 2578-2584.
Batzilla, C. F., Rachid, S., Engelmann, S., Hecker, M., Hacker, J. and Ziebuhr, W. (2006) Impact of the accessory gene regulatory system (Agr) on extracellular proteins, codY expression and amino acid metabolism in Staphylococcus epidermidis. Proteomics, 6, 3602-3613.
2005
Hahn, J., Maier, B., Haijema, B. J., Sheetz, M. and Dubnau, D. (2005) Transformation proteins and DNA uptake localize to the cell poles in Bacillus subtilis. Cell, 122, 59-71.
Frommberger, M., Hertkorn, N., Englmann, M., Jakoby, S., Hartmann, A., Kettrup, A. and Schmitt-Kopplin, P. (2005) Analysis of N-acylhomoserine lactones after alkaline hydrolysis and anion-exchange solid-phase extraction by capillary zone electrophoresis-mass spectrometry. Electrophoresis, 26, 1523-1532.
2004
Mascher, T., Zimmer, S. L., Smith, T.-A. and Helmann, J. D. (2004) Antibiotic-inducible promoter regulated by the cell envelope stress-sensing two-component system LiaRS of Bacillus subtilis. Antimicrob. Agents Chemother., 48, 2888-2896.
Maier, B., Chen, I., Dubnau, D. and Sheetz, M. P. (2004) DNA transport into Bacillus subtilis requires proton motive force to generate large molecular forces. Nat. Struct. Mol. Biol., 11, 643-649.
2003
Mascher, T., Margulis, N. G., Wang, T., Ye, R. W. and Helmann, J. D. (2003) Cell wall stress responses in Bacillus subtilis: the regulatory network of the bacitracin stimulon. Mol. Microbiol., 50, 1591-1604.
1999
Ziebuhr, W., Krimmer, V., Rachid, S., Lössner, I., Götz, F. and Hacker, J. (1999) A novel mechanism of phase variation of virulence in Staphylococcus epidermidis: evidence for control of the polysaccharide intercellular adhesin synthesis by alternating insertion and excision of the insertion sequence element IS256. Mol. Microbiol., 32, 345-356.
1996
Kinder, M. and Wiechert, W. (1996) Stochastic simulation of biotechnical processes. Mathematics and Computers in Simulation 42 (2-3):17, 42, 171-178.
Funding
Deutsche Forschungsgemeinschaft
Funding Period:
07/2012-06/2018